Publications
2024
Durand, K., An, H., Nam, K. 2024. Invasive fall armyworms are corn strains. Scientific Reports, 14, 5696. DOI : 10.1038/s41598-024-56301-0.
Durand, K., Yainna, S., Nam, K. 2024. Population genomics unravels a lag phase during the global fall armyworm invasion. Communications Biology, 7, 957. DOI : 10.1038/s42003-024-06634-3.
Leclerc, L., Nguyen, T.H., Duval, P., Mariotti, V., Petitot, A.-S., Orjuela, J., Ogier, J.-C., Gaudriault, S., Champion, A., Nègre, N. 2024. Early transcriptomic responses of rice leaves to herbivory by Spodoptera frugiperda. Scientific Reports, 14, 2836. DOI : 10.1038/s41598-024-53348-x.
Nam, K., Nègre, N., Saldamando Benjumea, C.I. 2024. Two host-plant strains in the fall armyworm. Insect Science, 31, 1675-1683. DOI : 10.1111/1744-7917.13346.
Soubeyrand, S., Estoup, A., Cruaud, A., Malembic-Maher, S., Meynard, C., Ravigné, V., Barbier, M., Barrès, B., Berthier, K., Boitard, S., Dallot, S., Gaba, S., Grosdidier, M., Hannachi, M., Jacques, M.A., Leclerc, M., Lucas, P., Martinetti, D., Mougel, C., Robert, C., Roques, A., Rossi, J.P., Suffert, F., Abad, P., Auger-Rozenberg, M.A., Ay, J.S., Bardin, M., Bernard, H., Bohan, D.A., Candresse, T., Castagnone-Sereno, P., Danchin, E.G.J., Delmas, C.E.L., Ezanno, P., Fabre, F., Facon, B., Gabriel, E., Gaudin, J., Gauffre, B., Gautier, M., Guinat, C., Lavigne, C., Lemaire, O., Martinez, C., Michel, L., Moury, B., Nam, K., Nédellec, C., Ogliastro, M., Papaïx, J., Parisey, N., Poggi, S., Radici, A., Rasplus J.-Y., Reboud, X., Robin, C., Roche, M., Rusch, A., Sauvion, N., Streito, J.-C., Verdin, E., Walker A.S., Xuéreb, A., Thébaud, G., Morris, C.E. 2024. Building integrated plant health surveillance: a proactive research agenda for anticipating and mitigating disease and pest emergence. CABI Agriculture and Bioscience, 5, 72. DOI : 10.1186/s43170-024-00273-8.
Yainna, S., Hilliou, F., Haenniger, S., d'Alençon, E., Brévault, T., Nam, K. 2024. Adaptive evolution of invasive fall armyworms to maize with potential involvement of Cytochrome P450 genes. BMC Genomics, 25, 949. DOI : 10.1186/s12864-024-10845-7.
Yainna, S., Hilliou, F., Haenniger, S., d'Alençon, E., Brévault, T., Nam, K. 2024. Correction: Adaptive evolution of invasive fall armyworms to maize with potential involvement of cytochrome P450 genes. BMC Genomics, 25, 1076. DOI : 10.1186/s12864-024-10935-6.
2023
Lan, L., Nègre, N. 2023. Heterosis effect for larval performance of fall armyworm interstrain hybrids. Insect Science, DOI : 10.1111/1744-7917.13295.
Rane, R., Walsh, T.K., Lenancker, P., Gock, A., Dao, T.H., Nguyen, V.L., Khin, T.N., Amalin, D., Chittarath, K., Faheem, M., Annamalai, S., Thanarajoo, S.S., Trisyono, Y.A., Khay, S., Kim, J., Kuniata, L., Powell, K., Kalyebi, A., Otim, M.H., Nam, K., d'Alencon, E., Gordon, K.H.J., Tay, W.T. 2023. Complex multiple introductions drive fall armyworm invasions into Asia and Australia. Scientific reports, 13, 660. DOI : 10.1038/s41598-023-27501-x.
Sureshbabu, A., Smirnova, E., Karthikeyan, A., Moniruzzaman, M., Kalaiselvi, S., Nam, K., Goff, G.L., Min, T. 2023. The impact of curcumin on livestock and poultry animal's performance and management of insect pests. Frontiers in Veterinary Science, 10, 1048067. DOI : 10.3389/fvets.2023.1048067.
2022
Durand, K., Yainna, S., Nam, K. 2022. Incipient speciation between host-plant strains in the fall armyworm. BMC Ecology and Evolution, 22, 52. DOI : 10.1186/s12862-022-02008-7.
Eychenne, M., Girard, P.-A., Frayssinet, M., Lan, L., Pagès, S., Duvic, B., Nègre, N. 2022. Mutagenesis of both prophenoloxidases in the fall armyworm induces major defects in metamorphosis. Journal of Insect Physiology, 139, 104399. DOI : 10.1016/j.jinsphys.2022.104399.
Fiteni, E., Durand, K., Gimenez, S., Meagher, R.L., Jr., Legeai, F., Kergoat, G.J., Negre, N., d'Alencon, E., Nam, K. 2022. Host-plant adaptation as a driver of incipient speciation in the fall armyworm (Spodoptera frugiperda). BMC Ecology and Evolution, 22, 133. DOI : 10.1186/s12862-022-02090-x.
Habib, K.A., Nam, K., Xiao, Y., Sathi, J., Islam, M.N., Panhwar, S.K., Habib, A.H.M.S. 2022. Population structure, phylogeography and demographic history of Tenualosa ilisha populations in the Indian Ocean region inferred from mitochondrial DNA sequence variation. Regional Studies in Marine Science, 54, 102478. DOI : 10.1016/j.rsma.2022.102478.
Kenis, M., Benelli, G., Biondi, A., Calatayud, P.-A., Day, R., Desneux, N., Harrison, R.D., Kriticos, D., Rwomushana, I., van den Berg, J., Verheggen, F., Zhang, Y.-J., Agboyi, L.K., Ahissou, R.B., Ba, M.N., Bernal, J., de Freitas Bueno, A., Carrière, Y., Carvalho, G.A., Chen, X.-X., Cicero, L., du Plessis, H., Early, R., Fallet, P., Fiaboe, K.K.M., Firake, D.M., Goergen, G., Groot, A.T., Guedes, R.N.C., Gupta, A., Hu, G., Huang, F.N., Jaber, L.R., Malo, E.A., McCarthy, C.B., Meagher, R.L.J., Mohamed, S., Sanchez, D.M., Nagoshi, R.N., Nègre, N., Niassy, S., Ota, N., Nyamukondiwa, C., Omoto, C., Palli, S.R., Pavela, R., Ramirez-Romero, R., Rojas, J.C., Subramanian, S., Tabashnik, B.E., Tay, W.T., Virla, E.G., Wang, S., Williams, T., Zang, L.-S., Zhang, L., Wu, K. 2022. Invasiveness, biology, ecology, and management of the fall armyworm, Spodoptera frugiperda. Entomologia Generalis. DOI : 10.1127/entomologia/2022/1659.
Lefouili, M., Nam, K. 2022. The evaluation of Bcftools mpileup and GATK HaplotypeCaller for variant calling in non‑human species. Scientific reports, 12, 11331. DOI : 10.1038/s41598-022-15563-2.
Nhim, S., Gimenez, S., Nait-Saidi, R., Severac, D., Nam, K., d'Alençon, E., Nègre, N. 2022. H3K9me2 genome-wide distribution in the holocentric insect Spodoptera frugiperda (Lepidoptera: Noctuidae). Genomics, 114, 384-397. DOI : 10.1016/j.ygeno.2021.12.014.
Orsucci, M., Moné, Y., Audiot, P., Gimenez, S., Nhim, S., Naït-Saïdi, R., Frayssinet, M., Dumont, G., Boudon, J.-P., Vabre, M., Rialle, S., Koual, R., Kergoat, G.J., Nagoshi, R.N., Meagher, R.L., d’Alençon, E., Nègre, N. 2022. Transcriptional differences between the two host strains of Spodoptera frugiperda (Lepidoptera: Noctuidae). Peer Community Journal, 2. DOI : 10.24072/pcjournal.77.
Tay, W.T., Rane, R.V., Padovan, A., Walsh, T.K., Elfekih, S., Downes, S., Nam, K., d’Alençon, E., Zhang, J., Wu, Y., Nègre, N., Kunz, D., Kriticos, D.J., Czepak, C., Otim, M.H., Gordon, K.H.J. 2022. Global population genomic signature of Spodoptera frugiperda (fall armyworm) supports complex introduction events across the Old World. Communications Biology, 5, 297. DOI : 10.1038/s42003-022-03230-1.
Yainna, S., Tay, W.T., Durand, K., Fiteni, E., Hilliou, F., Legeai, F., Clamens, A.L., Gimenez, S., Asokan, R., Kalleshwaraswamy, C.M., Deshmukh, S.S., Meagher, R.L., Jr., Blanco, C.A., Silvie, P., Brevault, T., Dassou, A., Kergoat, G.J., Walsh, T., Gordon, K., Negre, N., d'Alencon, E., Nam, K. 2022. The evolutionary process of invasion in the fall armyworm (Spodoptera frugiperda). Scientific Reports, 12, 21063. DOI : 10.1038/s41598-022-25529-z.
2021
Gimenez, S., Seninet, I., Orsucci, M., Audiot, P., Nègre, N., Nam, K., Streiff, R., d'Alençon, E. 2021. Integrated miRNA and transcriptome profiling to explore the molecular determinism of convergent adaptation to corn in two lepidopteran pests of agriculture. BMC genomics, 22, 606-606. DOI : 10.1186/s12864-021-07905-7.
Kergoat, G.J., Goldstein, P.Z., Le Ru, B., Meagher, R.L. Jr, Zilli, A., Mitchell, A., Clamens, A.L., Gimenez, S, Barbut, J., Nègre, N., d'Alençon, E., Nam, K. 2021. A novel reference dated phylogeny for the genus Spodoptera Guenée (Lepidoptera: Noctuidae: Noctuinae): new insights into the evolution of a pest-rich genus. Molecular Phylogenetics and Evolution, 161, 107161. DOI : 10.1016/j.ympev.2021.107161.
Roy, M.C., Nam, K., Kim, J., Stanley, D., Kim, Y. 2021. Thromboxane mobilizes insect blood cells to infection foci. Frontiers in Immunology, 12. DOI : 10.3389/fimmu.2021.791319.
Yainna, S., Nègre, N., Silvie, P.J., Brévault, T., Tay, W.T., Gordon, K., dAlençon, E., Walsh, T., Nam, K. 2021. Geographic monitoring of insecticide resistance mutations in native and invasive populations of the fall armyworm. Insects, 12, 468. DOI : 10.3390/insects12050468.
2020
Gimenez, S., Abdelgaffar, H., Le Goff, G., Hilliou, F., Blanco, C. A., Hänniger, S., Bretaudeau, A., Legeai, F., Nègre, N., Jurat-Fuentes, J. L., d’Alençon, E., Nam, K. 2020. Adaptation by copy number variation increases insecticide resistance in the fall armyworm. Communications Biology, 3, 664. DOI : 10.1038/s42003-020-01382-6.
Huot, L., Bigourdan, A., Pages, S., Ogier, J.-C., Girard, P.-A., Negre, N., Duvic, B. 2020. Partner-specific induction of Spodoptera frugiperda immune genes in response to the entomopathogenic nematobacterial complex Steinernema carpocapsae-Xenorhabdus nematophila. Developmental and Comparative Immunology, 108, 103676. DOI : 10.1016/j.dci.2020.103676. https://hal.inrae.fr/hal-02516411
Nam, K., Nhim, S., Robin, S., Bretaudeau, A., Nègre, N., d’Alençon, E. 2020. Positive selection alone is sufficient for whole genome differentiation at the early stage of speciation process in the fall armyworm. BMC Evolutionary Biology, 20, 152. DOI : 10.1186/s12862-020-01715-3.
Orsucci, M., Moné, Y., Audiot, P., Gimenez, S., Nhim, S., Naït-Saïdi, R., Frayssinet, M., Dumont, G., Boudon, J.-P., Vabre, M., Rialle, S., Koual, R., Kergoat, G.J., Nagoshi, R.N., Meagher, R.L., d'Alencon, E., Nègre, N. 2020. Transcriptional differences between the two host strains of Spodoptera frugiperda (Lepidoptera: Noctuidae). bioRxiv, 263186, ver. 2 peer-reviewed and recommended by PCI Evolution Biology. DOI : 10.24072/pci.evolbiol.100102.
Zhang, L., Liu, B., Zheng, W., Liu, C., Zhang, D., Zhao, S., Li, Z., Xu, P., Wilson, K., Withers, A., Jones, C.M., Smith, J.A., Chipabika, G., Kachigamba, D. L., Nam, K., d'Alençon, E., Liu, B., Liang, X., Jin, M., Wu, C., Chakrabarty, S., Yang, X., Jiang, Y., Liu, J., Liu, X., Quan, W., Wang, G., Fan, W., Qian, W., Wu, K., Xiao, Y. 2020. Genetic structure and insecticide resistance characteristics of fall armyworm populations invading China. Molecular Ecology Resources. DOI : 10.1111/1755-0998.13219. https://hal.inrae.fr/hal-02919813
2019
Huot, L., George, S., Girard, P.-A., Severac, D., Nègre, N., Duvic, B. 2019. Spodoptera frugiperda transcriptional response to infestation by Steinernema carpocapsae. Scientific Reports, 9 (1), 13 p. DOI : 10.1038/s41598-019-49410-8. http://prodinra.inra.fr/record/483762
Pigeyre, L., Schatz, M., Ravallec, M., Gasmi, L., Negre, N., Clouet, C., Seveno, M., El Koulali, K., Decourcelle, M., Guerardel, Y., Cot, D., Dupressoir, T., Gosselin-Grenet, A.-S., Ogliastro, M.-H. 2019. Interaction of a densovirus with glycans of the peritrophic matrix mediates oral infection of the Lepidopteran pest Spodoptera frugiperda. Viruses, 11 (9), 21 p. DOI : 10.3390/v11090870. http://prodinra.inra.fr/record/486352
2018
Chen, Z.-H., Zhang, M., Lv, F.-H., Ren, Li, W.-R., Liu, M.-J., Nam, K. W., Bruford, M. W., Li, M.-H. 2018. Contrasting patterns of genomic diversity reveal accelerated genetic drift but reduced directional selection on X-chromosome in wild and domestic sheep species. Genome Biology and Evolution, 10 (5), 1282-1297. DOI : 10.1093/gbe/evy085. http://prodinra.inra.fr/record/442635
Moné, Y., Nhim, S., Gimenez, S., Legeai, F., Seninet, I., Parrinello, H., Nègre, N., D'Alençon, E. 2018. Characterization and expression profiling of microRNAs in response to plant feeding in two host-plant strains of the lepidopteran pest Spodoptera frugiperda. BMC Genomics, 19 (1), 15 p. DOI : 10.1186/s12864-018-5119-6. http://prodinra.inra.fr/record/452867
Orsucci, M., Audiot, P., Nidelet, S., Dorkeld, F., Pommier, A., Vabre, M., Severac, D., Rohmer, M., Gschloessl, B., Streiff, R. 2018. Transcriptomic response of female adult moths to host and non-host plants in two closely related species. BMC Evolutionary Biology, 18. DOI : 10.1186/s12862-018-1257-3. http://prodinra.inra.fr/record/448988
Orsucci, M., Audiot, P., Dorkeld, F., Pommier, A., Vabre, M., Gschloessl, B., Rialle, S., Severac, D., Bourguet, D., Streiff, R. 2018. Larval transcriptomic response to host plants in two related phytophagous lepidopteran species: implications for host specialization and species divergence. BMC Genomics, 19. DOI : 10.1186/s12864-018-4589-x. http://prodinra.inra.fr/record/428807
Rizk, F., Laverdure, S., D'Alençon, E., Bossin, H., Dupressoir, T. 2018. Linear Lepidopteran ambidensovirus 1 sequences drive random integration of a reporter gene in transfected Spodoptera frugiperda cells. PeerJ, 6, 23 p. DOI : 10.7717/peerj.4860. http://prodinra.inra.fr/record/433581
2017
Bonneaud, N., Layalle, S., Colomb, S., Jourdan, C., Ghysen, A., Severac, D., Dantec, C., Negre, N., Maschat, F. 2017. Control of nerve cord formation by Engrailed and Gooseberry-Neuro: A multi-step, coordinated process. Developmental Biology, 432 (2), 273-285. DOI : 10.1016/j.ydbio.2017.10.018. http://prodinra.inra.fr/record/444098
Cheng, T., Wu, J., Wu, Y., Chilukuri, R. V., Huang, L., Yamamoto, K., Feng, L., Li, W., Chen, Z., Guo, H., Liu, J., Li, S., Wang, X., Peng, L., Liu, D., Guo, Y., Fu, B., Li, Z., Liu, C., Chen, Y., Tomar, A., Hilliou, F., Montagné, N., Jacquin-Joly, E., D'Alençon, E., Seth, R. K., Bhatnagar, R. K., Jouraku, A., Shiotsuki, T., Kadono-Okuda, K., Promboon, A., Smagghe, G., Arunkumar, K. P., Kishino, H., Goldsmith, M. R., Feng, Q., Xia, Q., Mita, K. 2017. Genomic adaptation to polyphagy and insecticides in a major East Asian noctuid pest. Nature Ecology and Evolution, 1 (11), 1747-1756. DOI : 10.1038/s41559-017-0314-4. http://prodinra.inra.fr/record/417608
Erclik, T., Li, X., Courgeon, M., Bertet, C., Chen, Z., Baumert, R., Ng, J., Koo, C., Arain, U., Behnia, R., del Valle Rodriguez, A., Senderowicz, L., Negre, N., White, K.P., Desplan, C. 2017. Integration of temporal and spatial patterning generates neural diversity. Nature, 541 (7637), 365-370, 10.1038/nature20794. http://prodinra.inra.fr/record/463792
Gouin, A., Bretaudeau, A., Nam, K., Gimenez, S., Aury, J.-M., Duvic, B., Hilliou, F., Durand, N., Montagné, N., Darboux, I., Kuwar, S., Chertemps, T., Siaussat, D., Bretschneider, A., Moné, Y., Ahn, S.-J., Hänniger, S., Gosselin-Grenet, A.-S., Neunemann, D., Maumus, F., Luyten, I., Labadie, K., Xu, W., Koutroumpa, F., Escoubas, J.-M., Llopis, A., Maïbèche-Coisne, M., Salasc, F., Tomar, A., Anderson, A. R., Khan, S. A., Dumas, P., Orsucci, M., Guy, J., Belser, C., Alberti, A., Noel, B., Couloux, A., Mercier, J., Nidelet, S., Dubois, E., Liu, N.-Y., Boulogne, I., Mirabeau, O., Le Goff, G., Gordon, K., Oakeshott, J., Consoli, F. L., Volkoff, A.-N., Fescemyer, H. W., Marden, J. H., Luthe, D. S., Herrero, S., Heckel, D. G., Wincker, P., Kergoat, G. J., Amselem, J., Quesneville, H., Groot, A. T., Jacquin-Joly, E., Nègre, N., Lemaitre, C., Legeai, F., D'Alençon, E., Fournier, P. 2017. Two genomes of highly polyphagous lepidopteran pests (Spodoptera frugiperda, Noctuidae) with different host-plant ranges. Scientific Reports, 7 (1), 11816. DOI : 10.1038/s41598-017-10461-4. http://prodinra.inra.fr/record/411711
Nam, K. W., Lee, K. W., Chung, O., Yim, H.-S., Cha, S.-S., Lee, S.-W., Jun, J., Cho, Y. S., Bhak, J., de Magalhaes, J. P., Lee, J.-H., Jeong, J.-Y. 2017. Analysis of the FGF gene family provides insights into aquatic adaptation in cetaceans. Scientific Reports, 7, 40233. DOI : 10.1038/srep40233. http://prodinra.inra.fr/record/396314
Nam, K., Munch, K., Mailund, T., Nater, A., Greminger, M. P., Krutzen, M., Marques-Bonet, T., Schierup, M. H., 2017. Evidence that the rate of strong selective sweeps increases with population size in the great apes. Proceedings of the National Academy of Sciences of the United States of America, 114 (7), 1613-1618. DOI : 10.1073/pnas.1605660114. http://prodinra.inra.fr/record/420795
2016
Esquer Garrigos, Y., Greenfield, M. D., Party, V., Streiff, R. 2016. Characterization of 16 novel microsatellite loci for Ephippiger diurnus (Orthoptera: Tettigoniidae) using pyrosequencing technology and cross-species amplification. European Journal of Entomology, 113, 302- 306. DOI : 10.14411/eje.2016.037. http://prodinra.inra.fr/record/351529
Greenfield, M. D., Esquer Garrigos, Y., Streiff, R., Party, V., 2016. Animal choruses emerge from receiver psychology. Scientific Reports, 6, 9. DOI : 10.1038/srep34369.
Lobon, I., Tucci, S., de Manuel, M., Ghirotto, S., Benazzo, A., Prado-Martinez, J., Lorente-Galdos, B., Nam, K., Dabad, M., Hernandez-Rodriguez, J., Comas, D., Navarro, A., Schierup, M. H., Andres, A. M., Barbujani, G., Hvilsom, C., Marques-Bonet, T. 2016. Demographic history of the genus Pan inferred from whole mitochondrial genome reconstructions. Genome Biology and Evolution, 8, 2020-2030. DOI : 10.1093/gbe/evw124. http://prodinra.inra.fr/record/369705
Munch, K., Nam, K. W., Schierup, M. H., Mailund, T. 2016. Selective sweeps across twenty millions years of primate evolution. Molecular Biology and Evolution, 33 (12), 3065-3074. DOI : 10.1093/molbev/msw199. http://prodinra.inra.fr/record/387066
Orsucci, M., Audiot, P., Pommier, A., Raynaud, C., Ramora, B., Zanetto, A., Bourguet, D., Streiff, R., 2016. Host specialization involving attraction, avoidance and performance, in two phytophagous moth species. Journal of Evolutionary Biology, 29 (1), 114-125. DOI : 10.1111/jeb.12766. http://prodinra.inra.fr/record/351252
2015
Dumas, P., Barbut, J., Le Ru, B., Silvain, J.-F., Clamens, A. L., D'Alençon, E., Kergoat, G. 2015. Phylogenetic molecular species delimitations unravel potential new species in the pest genus Spodoptera Guenée, 1852 (Lepidoptera, Noctuidae). Plos One, 10 (4), e0122407. DOI : 10.1371/journal.pone.0122407. http://prodinra.inra.fr/record/309986
Dumas, P., Legeai, F., Lemaitre, C., Scaon, E., Orsucci, M., Labadie, K., Gimenez, S., Clamens, A. L., Henri, H., Vavre, F., Aury, J. M., Fournier, P., Kergoat, G., D'Alençon, E. 2015. Spodoptera frugiperda (Lepidoptera: Noctuidae) host-plant variants: two host strains or two distinct species ? Genetica, 143 (3), 305-316. DOI : 10.1007/s10709-015-9829-2. http://prodinra.inra.fr/record/306622
Dutheil, J. Y., Munch, K., Nam, K., Mailund, T., Schierup, M. H., 2015. Strong selective sweeps on the X chromosome in the human-chimpanzee ancestor explain its low divergence. PLoS Genetics, 11, e1005451. DOI : 10.1371/journal.pgen.1005451. http://prodinra.inra.fr/record/369698
Nam, K., Munch, K., Hobolth, A., Dutheil, J. Y., Veeramah, K. R., Woerner, A. E., Hammer, M. F., Mailund, T., Schierup, M. H. 2015. Extreme selective sweeps independently targeted the X chromosomes of the great apes. Proceedings of the National Academy of Sciences of the United States of America, 112, 6413-6418. DOI : 10.1073/pnas.1419306112. http://prodinra.inra.fr/record/369699
Simon, J.-C., D'Alençon, E., Guy, E., Jacquin-Joly, E., Jaquiéry, J., Nouhaud, P., Peccoud, J., Sugio, A., Streiff, R. 2015. Genomics of adaptation to host-plants in herbivorous insects. Briefings in Functional Genomics, 14 (6), 413-423. DOI : 10.1093/bfgp/elv015. http://prodinra.inra.fr/record/310218
2014
Arthur, R. K., Ma, L., Slattery, M., Spokony, R. F., Ostapenko, A., Nègre, N., White, K. P. 2014. Evolution of H3K27me3-marked chromatin is linked to gene expression evolution and to patterns of gene duplication and diversification. Genome Research, 24 (7), 1115-1124. DOI : 10.1101/gr.162008.113. http://prodinra.inra.fr/record/278931
Legeai, F., Gimenez, S., Duvic, B., Escoubas, J.-M., Gosselin-Grenet, A.-S., Blanc, F., Cousserans, F., Seninet, I., Bretaudeau, A., Mutel, D., Girard, P.-A., Monsempes, C., Magdelenat, G., Hilliou, F., Feyereisen, R., Ogliastro, M.-H., Volkoff, A.-N., Jacquin-Joly, E., D'Alençon, E., Negre, N., Fournier, P. 2014. Establishment and analysis of a reference transcriptome for Spodoptera frugiperda. BMC Genomics, 15, 704. DOI : 10.1186/1471-2164-15-704. http://prodinra.inra.fr/record/269917
Li, C., Zhang, Y., Li, J., Kong, L., Hu, H., Pan, H., Xu, L., Deng, Y., Li, Q., Jin, L., Yu, H., Chen, Y., Liu, B., Yang, L., Liu, S., Zhang, Y., Lang, Y., Xia, J., He, W., Shi, Q., Subramanian, S., Millar, C. D., Meader, S., Rands, C. M., Fujita, M. K., Greenwold, M. J., Castoe, T. A., Pollock, D. D., Gu, W., Nam, K., Ellegren, H., Ho, S. Y., Burt, D. W., Ponting, C. P., Jarvis, E. D., Gilbert, M. T., Yang, H., Wang, J., Lambert, D. M., Wang, J., Zhang, G., 2014. Two Antarctic penguin genomes reveal insights into their evolutionary history and molecular changes related to the Antarctic environment. Gigascience, 3, 27. DOI : 10.1186/2047-217x-3-27. http://prodinra.inra.fr/record/369700
Slattery, M., Ma, L., Spokony, R. F., Arthur, R. K., Kheradpour, P., Kundaje, A., Nègre, N., Crofts, A., Ptashkin, R., Zieba, J., Ostapenko, A., Suchy, S., Victorsen, A., Jameel, N., Grundstad, A. J., Gao, W., Moran, J. R., Rehm, E. J., Grossman, R. L., Kellis, M., White, K. P. 2014. Diverse patterns of genomic targeting by transcriptional regulators in Drosophila melanogaster. Genome Research, 24 (7), 1224-1235. DOI : 10.1101/gr.168807.113. http://prodinra.inra.fr/record/278932
Tagu, D., Colbourne, J. K., Nègre, N. 2014. Genomic data integration for ecological and evolutionary traits in non-model organisms. BMC Genomics, 15. DOI : 10.1186/1471-2164-15-490. http://prodinra.inra.fr/record/281892
Vogelmann, J., Le Gall, A., Dejardin, S., Allemand, F., Gamot, A., Labesse, G., Cuvier, O., Nègre, N., Cohen-Gonsaud, M., Margeat, E., Nöllmann, M. 2014. Chromatin insulator factors involved in long-range DNA interactions and their role in the folding of the Drosophila genome. PLoS Genetics, 10 (8). DOI : 10.1371/journal.pgen.1004544. http://prodinra.inra.fr/record/304965
2013
d’Alençon, E., Bierne, N., Girard, P.-A., Magdelenat, G., Gimenez, S., Seninet, S., Escoubas, J.-M. 2013. Evolutionary history of x-tox genes in three Lepidopteran species: origin, evolution of primary and secondary structure and alternative splicing, generated a repertoire of immune-related proteins. Insect Biochemistry and Molecular Biology, 43 (1), 54-64. DOI : 10.1016/j.ibmb.2012.10.012.
2012
Dumas, P., Clamens, A.-L., Kergoat, G. J., Gimenez, S., d’Alençon, E. 2012. Isolation and characterization of microsatellite loci in the fall armyworm, Spodoptera frugiperda (Lepidoptera, Noctuidae). In : Permanent Genetic Ressources added to Molecular Ecology Resources Database 1 December 2011 – 31 January 2012. Molecular Ecology Resources, 12, 570-572. http://tomato.bio.trinity.edu/manuscripts/12-3/mer-11-0382.pdf.
2011
Stanojcic, S., Gimenez, S., Permal, E., Cousserans, F., Quesneville, H., Fournier, P., d'Alençon, E. 2011. Correlation of rasiRNA expression with heterochromatin formation during development of the holocentric insect Spodoptera frugiperda. PLoS One, 6 (9), e24746. DOI : 10.1371/journal.pone.0024746.
d’Alençon, E., Nègre, N., Stanojcic, S., Alassoeur, B., Gimenez, S., Abd-Alla, A., Juliant, S., Fournier, P. 2011. Characterization of a CENP-B homolog in the holocentric Lepidoptera Spodoptera frugiperda. Gene, 485, 91-101.
2010
d’Alençon, E., Sezutsu, H., Legeai, F., Permal, E., Bernard-Samain, S., Gimenez, S., Gagneur, C., Cousserans, F., Shimomura, M., Brun-Barale, A., Flutre, T., Couloux, A., East, P., Gordon, K., Mita, K., Quesneville, H., Fournier, P., Feyereisen, R. 2010. Extensive synteny conservation of holocentric chromosomes in Lepidoptera despite high rates of local genome rearrangements. Proceedings of the National Academy of Sciences of the United States of America, 107(17), 7680-5. DOI : 10.1073/pnas.0910413107.
2006
Negre, V., Hotelier, T., Volkoff, A.-N., Gimenez, S., Cousserans, F., Mita, K., Sabau, X., Rocher, J., Lopez-Ferber, M., d'Alencon, E., Audant, P., Sabourault, C., Bidegainberry, V., Hilliou, F., Fournier, P. 2006. SPODOBASE : an EST database for the lepidopteran crop pest Spodoptera. BMC Bioinformatics, 7, 322.
Brevets
d’Alençon, E., Stanojcic, S., Cousserans, F., Gimenez, S., Fournier, P., Quesneville, H., Permal, E. 2011. « Molécules utiles pour inhiber le développement d’une larve d’insecte ravageur de culture » Brevet européen 11/01/2011.
Thèses
Laëtitia LECLERC. 2023. Modulation précoce de la voie des jasmonates chez le riz (Oryza sativa) par le microbiote oral des larves de Spodoptera frugiperda. Thèse de doctorat de l'Université de Montpellier, Montpellier, France, sous la direction de Nicolas NEGRE, Sophie GAUDRIAULT et Antony CHAMPION.
Sudeeptha YAINNA-KUMARIHAMI. 2023. Processus adaptatifs dans l'invasion globale de Spodoptera frugiperda (Lepidoptera : Noctuidae). Thèse de doctorat de l'Université de Montpellier, Montpellier, France, sous la direction d'Emmanuelle d'ALENÇON et Ki-woong NAM.
Sandra NHIM. 2018. Mécanismes de régulation épigénétique chez l'insecte holocentrique ravageur de culture Spodoptera frugiperda, Lépidoptera, Noctuidae. Thèse de doctorat de l'Université de Montpellier, Montpellier, France, sous la direction d'Emmanuelle d'ALENÇON et Nicolas NEGRE. http://www.biu-montpellier.fr/florabium/jsp/nnt.jsp?nnt=2018MONTG086.
Marion ORSUCCI. 2015. Rôle de la spécialisation à la plante hôte et de l'isolement reproducteur dans la divergence de lépidoptères ravageurs de cultures. Thèse de doctorat de l'Université de Montpellier, Montpellier, France, sous la direction de Réjane STREIFF. http://www.biu-montpellier.fr/florabium/jsp/nnt.jsp?nnt=2015MONTS074.
Pascaline DUMAS. 2013. Etude intégrative du statut des deux variants adaptatifs à la plante hôte de Spodoptera frugiperda (Lepidoptera: Noctuidae). Thèse de doctorat en biologie de l'évolution et écologie de l'Université Montpellier 2, Montpellier, France, sous la direction d'Emmanuelle d'ALENÇON et de Gael KERGOAT.
https://www.biu-montpellier.fr/florabium/jsp/nnt.jsp?nnt=2013MON20148.
