Publications

2020

• Cambon, M.C., Lafont, P., Frayssinet, M., Lanois, A., Ogier, J.-C., Pagès, S., Parthuisot, N., Ferdy, J.-B., Gaudriault, S., 2020. Bacterial community profile after the lethal infection of Steinernema-Xenorhabdus pairs into soil-reared Tenebrio molitor larvae. FEMS Microbiol Ecol 96, 1. doi:10.1093/femsec/fiaa009
• Pagès, S., Ogier, J.-C., Gaudriault, S., 2020. A novel semi-selective medium for Pseudomonas protegens isolation from soil samples. J Microbiol Methods 172, 105911. doi:10.1016/j.mimet.2020.105911
• Ogier, J.-C., Pagès, S., Frayssinet, M., Gaudriault, S., 2020. Entomopathogenic nematode-associated microbiota: from monoxenic paradigm to pathobiome. Microbiome 8, 25. doi:10.1186/s40168-020-00800-5

2019

• Ogier, J.-C., Pagès, S., Galan, M., Barret, M., Gaudriault, S., 2019. rpoB, a promising marker for analyzing the diversity of bacterial communities by amplicon sequencing. BMC Microbiol 19, 171–16. doi:10.1186/s12866-019-1546-z
• François, S., Mutuel, D., Duncan, A.B., Rodrigues, L.R., Danzelle, C., Lefevre, S., Santos, I., Frayssinet, M., Fernandez, E., Filloux, D., Roumagnac, P., Froissart, R., Ogliastro, M., 2019. A New Prevalent Densovirus Discovered in Acari. Insight from Metagenomics in Viral Communities Associated with Two-Spotted Mite (Tetranychus urticae) Populations. Viruses 11, 233. doi:10.3390/v11030233

2018

• François, S., Filloux, D., Fernandez, E., Ogliastro, M., Roumagnac, P., 2018. Viral Metagenomics Approaches for High-Resolution Screening of Multiplexed Arthropod and Plant Viral Communities. Methods Mol. Biol. 1746, 77–95. doi:10.1007/978-1-4939-7683-6_7
• François, S., Filloux, D., Frayssinet, M., Roumagnac, P., Martin, D.P., Ogliastro, M., Froissart, R., 2018. Increase in taxonomic assignment efficiency of viral reads in metagenomic studies. Virus Res. 244, 230–234. doi:10.1016/j.virusres.2017.11.011

2016

• François, S., Filloux, D., Roumagnac, P., Bigot, D., Gayral, P., Martin, D.P., Froissart, R., Ogliastro, M., 2016. Discovery of parvovirus-related sequences in an unexpected broad range of animals. Sci Rep 6, 30880. doi:10.1038/srep30880

2014

• François, S., Bernardo, P., Filloux, D., Roumagnac, P., Yaverkovski, N., Froissart, R., Ogliastro, M., 2014. A Novel Itera-Like Densovirus Isolated by Viral Metagenomics from the Sea Barley Hordeum marinum. Genome Announc 2, 59. doi:10.1128/genomeA.01196-14